Basic Statistics
Measure | Value |
---|---|
Filename | UHR_Rep2_Aligned.sortedByCoord.out.bam |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 2444 |
Sequences flagged as poor quality | 0 |
Sequence length | 21-100 |
%GC | 53 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
AGCAGCTGGAGGAAGACCTGTATGACGGCCAGGTGCTGCAGAAGCTCTTG | 5 | 0.20458265139116205 | No Hit |
GTGAATTGAGTCCACGCTCCACCGGAGCGCCCAGCCTCGGGGCCGCAGCA | 5 | 0.20458265139116205 | No Hit |
CCCATCTGCAAACTGGGTCTCCAGTTCCGTCACCTCCAAATTCAGCTTGT | 3 | 0.12274959083469722 | No Hit |
GGAGGAGCTGACCACAACTACAGAGATGATGATGGGCCGGTTCGAGCGGG | 3 | 0.12274959083469722 | No Hit |
GCAAGGATAAACATGTCCATCTTGCCCGTATTGGGAATTATCATCTGGCT | 3 | 0.12274959083469722 | No Hit |
CGTCACCACACCCGGCTAATTTTTTGTATATTTAGTAGAGACAGGGTTTC | 3 | 0.12274959083469722 | No Hit |
CTCAGGAAGGCGGATGGGGGCCCTGAAGTGCATGGCCAGAGAGACCAGCA | 3 | 0.12274959083469722 | No Hit |
CCCAGCACTTTGGGAGGCCGAGGCAGGCAGATCACGAGGTCAGGAGTTTG | 3 | 0.12274959083469722 | No Hit |
CTGGGCGGCACCCTGGCCAGGAAGCGGAGGGCGCGCGAGGTGAGTGACCT | 3 | 0.12274959083469722 | No Hit |
Adapter Content
Kmer Content
No overrepresented Kmers